FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | 25.fq |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 29759924 |
| Filtered Sequences | 0 |
| Sequence length | 49 |
| %GC | 52 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](Icons/error.png)
Per base sequence content
Per base GC content
![[WARN]](Icons/warning.png)
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 1526178 | 5.128299386786068 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC | 1146914 | 3.853887530089123 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC | 920919 | 3.094493789701882 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT | 816554 | 2.7438040500372245 | RNA PCR Primer, Index 1 (100% over 25bp) |
| AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 568779 | 1.9112246388801262 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC | 450245 | 1.5129238905314408 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 354933 | 1.1926542554342545 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 316970 | 1.0650900855795196 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 304432 | 1.022959601644144 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC | 236056 | 0.7932009503787711 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC | 229117 | 0.7698843585756469 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 186126 | 0.6254249842842341 | RNA PCR Primer, Index 1 (100% over 28bp) |
| AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC | 160659 | 0.5398501689722057 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC | 155987 | 0.5241512041495805 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 147431 | 0.49540113072869413 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC | 135802 | 0.45632509007751504 | RNA PCR Primer, Index 1 (100% over 33bp) |
| TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 121987 | 0.40990360056027025 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT | 118754 | 0.3990399975483809 | RNA PCR Primer, Index 1 (100% over 25bp) |
| GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA | 114975 | 0.3863417124317925 | No Hit |
| GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC | 113935 | 0.3828470798514136 | No Hit |
| CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCA | 112359 | 0.3775513674026856 | RNA PCR Primer, Index 7 (100% over 35bp) |
| TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 111253 | 0.373834960062398 | RNA PCR Primer, Index 1 (100% over 28bp) |
| ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC | 92965 | 0.312383190225889 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAC | 90421 | 0.30383478129850067 | RNA PCR Primer, Index 30 (100% over 36bp) |
| CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT | 90280 | 0.3033609897659685 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC | 88724 | 0.29813248178994006 | RNA PCR Primer, Index 1 (100% over 26bp) |
| ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC | 87799 | 0.2950242749275838 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 83612 | 0.28095501856792376 | RNA PCR Primer, Index 1 (100% over 29bp) |
| GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTTGGAATTCTCGGGTGCC | 82705 | 0.2779072957309972 | No Hit |
| GCATTGGTGGTTCAGTGGTAGAATTCTCGCCATGGAATTCTCGGGTGCC | 81720 | 0.27459747545054214 | No Hit |
| GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA | 79680 | 0.2677426192351835 | No Hit |
| AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 79023 | 0.26553495230700186 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC | 78148 | 0.2625947566263946 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC | 77965 | 0.2619798357011933 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC | 75106 | 0.2523729563287863 | RNA PCR Primer, Index 1 (100% over 27bp) |
| AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA | 74086 | 0.24894552822110702 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT | 70689 | 0.23753084853308093 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC | 69262 | 0.2327358094059649 | RNA PCR Primer, Index 2 (100% over 34bp) |
| TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC | 69214 | 0.23257451867148585 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 68968 | 0.23174790365728085 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 63276 | 0.21262151072697633 | RNA PCR Primer, Index 1 (100% over 32bp) |
| CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC | 62212 | 0.2090462327793579 | RNA PCR Primer, Index 1 (100% over 27bp) |
| GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC | 60235 | 0.20240307065300303 | No Hit |
| GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA | 59575 | 0.20018532305391643 | No Hit |
| AGCTACATCTGGCTACTGGGTCTCTGGAATTCTCGGGTGCCAAGGAACT | 59128 | 0.19868330308908047 | RNA PCR Primer, Index 1 (100% over 25bp) |
| ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC | 58576 | 0.19682845964257167 | RNA PCR Primer, Index 1 (100% over 24bp) |
| TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT | 57966 | 0.19477872322523404 | RNA PCR Primer, Index 1 (100% over 25bp) |
| CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC | 56218 | 0.1889050523112895 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TGTAAACATCCTCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 55356 | 0.186008539537937 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 54832 | 0.18424778235320763 | RNA PCR Primer, Index 1 (100% over 27bp) |
| ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA | 54113 | 0.1818317815596572 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA | 51864 | 0.17427463860458783 | No Hit |
| AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC | 50438 | 0.16948295970110677 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC | 49482 | 0.16627058590606617 | RNA PCR Primer, Index 1 (100% over 27bp) |
| GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC | 48127 | 0.16171748288066864 | No Hit |
| CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC | 47732 | 0.16039019454485165 | No Hit |
| GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTGGAATTCTCGGGTGCCA | 46846 | 0.15741303640425963 | No Hit |
| AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC | 44063 | 0.1480615340281111 | RNA PCR Primer, Index 1 (100% over 27bp) |
| CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG | 43799 | 0.14717443498847646 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT | 43135 | 0.14494324649484994 | RNA PCR Primer, Index 1 (100% over 25bp) |
| TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT | 42805 | 0.14383437269530663 | RNA PCR Primer, Index 1 (100% over 25bp) |
| GAGAGATCAGAGGCGCAGAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 42420 | 0.14254068659583943 | RNA PCR Primer, Index 1 (100% over 28bp) |
| TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC | 41674 | 0.14003395976414457 | RNA PCR Primer, Index 1 (100% over 26bp) |
| CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA | 39880 | 0.13400571856299096 | RNA PCR Primer, Index 1 (100% over 32bp) |
| AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA | 38728 | 0.13013474093549432 | RNA PCR Primer, Index 1 (100% over 28bp) |
| CCCCCCACTGCTAAATTTGACTGGCTTGGAATTCTCGGGTGCCAAGGAA | 38332 | 0.12880409237604237 | RNA PCR Primer, Index 1 (100% over 23bp) |
| GGCTGGTCCGATGGTAGTGGGTTACCAGAACTGGAATTCTCGGGTGCCA | 37588 | 0.12630408599161744 | No Hit |
| TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC | 37385 | 0.12562196059371658 | RNA PCR Primer, Index 1 (100% over 26bp) |
| GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC | 36130 | 0.12140487993181703 | No Hit |
| TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC | 35873 | 0.12054130245762724 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC | 35374 | 0.11886455086377236 | RNA PCR Primer, Index 1 (100% over 26bp) |
| TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT | 34294 | 0.11523550933799427 | RNA PCR Primer, Index 1 (100% over 30bp) |
| CCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTCC | 34067 | 0.11447273857285388 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC | 32870 | 0.11045055088178315 | RNA PCR Primer, Index 1 (100% over 27bp) |
| TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC | 32823 | 0.1102926203709391 | RNA PCR Primer, Index 1 (100% over 31bp) |
| TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC | 32543 | 0.1093517577531448 | RNA PCR Primer, Index 1 (100% over 26bp) |
| GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGTGGAATTCTCGGGTGC | 32258 | 0.10839409401717558 | No Hit |
| ATTCCACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAG | 31602 | 0.10618978731262889 | RNA PCR Primer, Index 1 (100% over 29bp) |
| TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC | 30296 | 0.10180133524534539 | RNA PCR Primer, Index 1 (100% over 27bp) |
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AATTC | 30293370 | 29.563755 | 290.5855 | 26 |
| TTCTC | 30412885 | 27.928722 | 273.2074 | 28 |
| ATTCT | 30285225 | 27.876223 | 274.1883 | 27 |
| GAATT | 30389940 | 23.997887 | 235.55319 | 25 |
| TCTCG | 30268680 | 23.79125 | 233.76756 | 29 |
| GCCAA | 26673380 | 23.567825 | 261.69006 | 37 |
| CCAAG | 26485355 | 23.401691 | 261.7538 | 38 |
| TGCCA | 27903600 | 23.253742 | 246.5935 | 36 |
| AACTC | 22203685 | 22.92114 | 304.99683 | 44 |
| GAACT | 25673980 | 21.445469 | 246.84163 | 43 |
| GGAAT | 30174685 | 20.394646 | 201.49065 | 24 |
| TGGAA | 29958580 | 20.248583 | 201.35263 | 23 |
| CTCGG | 29932160 | 20.136877 | 199.8039 | 30 |
| ACTCC | 18670520 | 19.229053 | 304.14487 | 45 |
| GTGCC | 28197880 | 18.970139 | 199.17342 | 35 |
| CAAGG | 26040190 | 18.6173 | 211.82016 | 39 |
| AAGGA | 25758540 | 18.4588 | 212.3171 | 40 |
| AGGAA | 25260240 | 18.101715 | 212.12564 | 41 |
| GGAAC | 24938820 | 17.829882 | 211.34976 | 42 |
| TCGGG | 29748100 | 16.193636 | 161.65771 | 31 |
| CGGGT | 29584680 | 16.104677 | 161.28664 | 32 |
| GGTGC | 29093175 | 15.837122 | 161.29225 | 34 |
| GGGTG | 29569120 | 13.024309 | 130.54541 | 33 |
| CTCCA | 12245875 | 12.612213 | 91.50881 | 45 |
| TCCAG | 10637635 | 8.864979 | 41.756256 | 45 |
| TTGGA | 13030670 | 8.306754 | 112.697235 | 22 |
| CCAGT | 9876200 | 8.23043 | 38.46912 | 42 |
| CAGTC | 8419800 | 7.0167236 | 38.474556 | 43 |
| AGTCA | 8149130 | 6.8069654 | 38.581585 | 44 |
| TCACC | 5469470 | 5.6330905 | 45.560314 | 45 |
| GTCAC | 6402010 | 5.3351784 | 38.498814 | 45 |
| CACCA | 4828525 | 5.2726 | 46.38096 | 45 |
| CTGGA | 7238555 | 4.881077 | 34.290154 | 23 |
| ACCAC | 4128600 | 4.508303 | 40.534195 | 45 |
| GACTG | 6100280 | 4.1135197 | 107.53593 | 11 |
| TCAGA | 4880890 | 4.0770054 | 135.66489 | 8 |
| ATGGA | 5763770 | 3.8956509 | 48.843857 | 22 |
| TTATC | 4170585 | 3.838841 | 145.8299 | 5 |
| GTGGA | 6916585 | 3.7738671 | 15.385237 | 23 |
| TATCA | 3791610 | 3.7002892 | 154.59879 | 6 |
| CCACT | 3530605 | 3.636224 | 30.411009 | 45 |
| TGATG | 5587970 | 3.5622027 | 100.986015 | 14 |
| CTTGG | 5543695 | 3.5257719 | 32.563736 | 23 |
| CAGAC | 3908960 | 3.453844 | 140.2759 | 9 |
| ACTGA | 4101275 | 3.4257934 | 132.31317 | 12 |
| CTGAT | 4345310 | 3.423373 | 124.836395 | 13 |
| AGACT | 4073715 | 3.402773 | 132.6796 | 10 |
| CTTAT | 3611480 | 3.3242095 | 145.6723 | 4 |
| ATCAG | 3954870 | 3.3035011 | 132.89491 | 7 |
| AGCTT | 4018710 | 3.1660674 | 124.62088 | 2 |
| GTAGT | 4747650 | 3.0265176 | 90.946236 | 5 |
| TAGCT | 3810215 | 3.001808 | 124.57332 | 1 |
| TGTTG | 4903470 | 2.9482155 | 94.809906 | 17 |
| GCTTA | 3639655 | 2.8674355 | 124.768105 | 3 |
| ACTTG | 3611265 | 2.845069 | 31.218267 | 22 |
| ATGTT | 3760910 | 2.801091 | 118.03249 | 16 |
| TTTGG | 4588745 | 2.758987 | 65.565094 | 21 |
| GTTGA | 4316580 | 2.7517207 | 93.51058 | 18 |
| TAGTA | 3434370 | 2.712003 | 112.565926 | 6 |
| TTGAC | 3359500 | 2.6467206 | 72.60672 | 19 |
| TGACT | 3243780 | 2.5555525 | 65.14048 | 20 |
| AGGTA | 3774650 | 2.5512333 | 97.73664 | 3 |
| GATGT | 4000970 | 2.5505266 | 101.27369 | 15 |
| GGTAG | 4579320 | 2.498595 | 78.67286 | 4 |
| TAGTT | 3330240 | 2.480332 | 93.951866 | 18 |
| AGTAG | 3618610 | 2.4457679 | 96.149445 | 7 |
| ATAGT | 3039375 | 2.4000893 | 101.07164 | 17 |
| TTGTA | 3145880 | 2.3430226 | 94.22631 | 13 |
| GTATA | 2888340 | 2.280822 | 96.55019 | 15 |
| TATAG | 2884295 | 2.277628 | 96.321915 | 16 |
| TGTAT | 3039710 | 2.2639477 | 92.47795 | 14 |
| ACTGG | 3351055 | 2.2596714 | 30.148321 | 22 |
| GTAGA | 3250100 | 2.1966968 | 67.677086 | 8 |
| CACTC | 2129560 | 2.1932664 | 23.433462 | 45 |
| AGATT | 2634325 | 2.0802355 | 78.05187 | 10 |
| ATTGT | 2747240 | 2.0461187 | 73.89031 | 12 |
| TGAGG | 3708840 | 2.0236385 | 77.55473 | 1 |
| TAGAT | 2509695 | 1.9818193 | 78.1414 | 9 |
| AGTTT | 2659855 | 1.9810356 | 71.95502 | 19 |
| GACTT | 2510615 | 1.9779422 | 30.73589 | 21 |
| GATTG | 3057685 | 1.9492042 | 64.24175 | 11 |
| GAGGT | 3564050 | 1.9446375 | 78.7132 | 2 |
| GTTTG | 3152795 | 1.8956206 | 62.54644 | 20 |
| ACTCA | 1592045 | 1.6434878 | 19.857082 | 45 |
| TGTGG | 3152060 | 1.6221105 | 10.978325 | 22 |
| GTTGG | 3006035 | 1.5469632 | 21.529186 | 21 |
| CTCAA | 1456015 | 1.5030624 | 16.588291 | 26 |
| GATGG | 2726050 | 1.4874032 | 34.442303 | 21 |
| AGTGG | 2629705 | 1.4348348 | 17.399168 | 14 |
| CGTGG | 2623765 | 1.4282691 | 6.380348 | 12 |
| CCTGG | 2080545 | 1.3996876 | 5.129673 | 17 |
| GCTGG | 2563490 | 1.3954579 | 14.820084 | 2 |
| AGTTG | 2046810 | 1.3047945 | 20.075502 | 9 |
| CCCCC | 1161575 | 1.2625198 | 25.046682 | 1 |
| CTGTG | 1974810 | 1.2559726 | 12.429905 | 21 |
| ACTGT | 1576110 | 1.2417094 | 24.16931 | 18 |
| AGGCT | 1831080 | 1.2347275 | 18.699924 | 19 |
| AGAAC | 1389930 | 1.2309605 | 27.82491 | 15 |
| CTGTT | 1613810 | 1.1991595 | 30.248125 | 19 |
| TCCCG | 1425365 | 1.1850837 | 19.74532 | 12 |
| GCTTG | 1846580 | 1.1744188 | 13.795021 | 20 |
| CAGAA | 1310150 | 1.160305 | 32.413445 | 15 |
| TTGAT | 1518575 | 1.1310207 | 40.406338 | 19 |
| GGCTG | 2072120 | 1.1279764 | 14.345518 | 1 |
| GTGGT | 2178435 | 1.1210645 | 14.280014 | 15 |
| TCAAT | 1136310 | 1.108942 | 15.682386 | 27 |
| AACTG | 1315135 | 1.0985317 | 25.845453 | 17 |
| GGCTT | 1695340 | 1.0782306 | 16.734737 | 19 |
| GCTGT | 1683515 | 1.0707101 | 8.895891 | 11 |
| GCCTG | 1589180 | 1.0691217 | 15.879227 | 17 |
| GGACT | 1571265 | 1.0595298 | 25.649841 | 4 |
| CCGTG | 1543055 | 1.0380912 | 6.1178412 | 11 |
| CACTT | 1055265 | 1.0274575 | 26.759771 | 6 |
| AAGAA | 1154005 | 1.0243976 | 28.035051 | 14 |
| TAGTG | 1605530 | 1.0234885 | 16.790562 | 15 |
| TCTGA | 1287830 | 1.0145932 | 5.593307 | 18 |
| AAGCT | 1208700 | 1.0096267 | 26.493582 | 1 |
| GCACT | 1210600 | 1.0088655 | 23.582558 | 5 |
| CCTGT | 1275765 | 1.0027541 | 17.860767 | 18 |
| AGCTG | 1421990 | 0.9588713 | 21.021063 | 2 |
| TTCCC | 960145 | 0.93267316 | 7.251473 | 8 |
| CCCAC | 822655 | 0.89622784 | 22.162975 | 4 |
| GAAGG | 1544810 | 0.8936733 | 21.00644 | 17 |
| ATTGG | 1394755 | 0.88912433 | 8.402148 | 3 |
| AATCC | 852335 | 0.879876 | 19.844877 | 8 |
| GCTAA | 1051655 | 0.878447 | 30.313261 | 10 |
| CCCGT | 1056210 | 0.8781591 | 6.441745 | 10 |
| TTCAA | 882420 | 0.861167 | 22.558172 | 1 |
| TTGAA | 1080295 | 0.85307163 | 25.148735 | 11 |
| ATTTG | 1139985 | 0.8490502 | 15.267335 | 15 |
| GGTGG | 1917855 | 0.84475756 | 8.193885 | 6 |
| CACTG | 992835 | 0.8273889 | 17.209034 | 6 |
| CAGTG | 1226060 | 0.8267524 | 11.448089 | 5 |
| GGCCT | 1201345 | 0.80820554 | 16.227623 | 16 |
| AGGAT | 1190185 | 0.8044294 | 15.714865 | 13 |
| ATACC | 777570 | 0.80269516 | 6.7353816 | 19 |
| CAGTT | 1018390 | 0.80231994 | 24.729315 | 8 |
| CAGGA | 1114610 | 0.7968847 | 16.651932 | 12 |
| CACGT | 952130 | 0.793467 | 6.228794 | 4 |
| TGGAC | 1171345 | 0.7898572 | 25.121359 | 3 |
| CAAGT | 926135 | 0.7736002 | 19.476923 | 3 |
| TTGCA | 981545 | 0.7732923 | 22.49493 | 3 |
| TGCTG | 1211370 | 0.77042735 | 6.9180255 | 16 |
| TGCAC | 918960 | 0.76582444 | 23.548918 | 4 |
| TTCTG | 1028780 | 0.76444656 | 6.455795 | 16 |
| AAGGC | 1067675 | 0.7633288 | 22.58852 | 18 |
| CGTTC | 970460 | 0.7627837 | 5.902567 | 6 |
| CATTG | 960825 | 0.7569684 | 13.081731 | 2 |
| AATTT | 818160 | 0.7548334 | 18.567865 | 14 |
| CTGCC | 906455 | 0.75364906 | 26.143885 | 4 |
| GTTCC | 949755 | 0.7465095 | 6.652897 | 15 |
| AGAAG | 1040870 | 0.74589694 | 26.201172 | 16 |
| ATTGC | 943175 | 0.7430631 | 22.608898 | 2 |
| CCCCA | 679640 | 0.7404225 | 22.418297 | 3 |
| GTCAG | 1094540 | 0.7380663 | 24.789438 | 13 |
| CCCTG | 885905 | 0.7365633 | 6.572079 | 2 |
| ACTGC | 880460 | 0.7337401 | 16.858273 | 7 |
| TGGTG | 1407390 | 0.7242699 | 8.509813 | 5 |
| TCAGT | 918630 | 0.72372586 | 14.678578 | 12 |
| GTAGG | 1324790 | 0.7228395 | 17.121658 | 8 |
| AGAAT | 862730 | 0.7223155 | 12.390484 | 20 |
| TGGCT | 1123540 | 0.7145678 | 11.167472 | 8 |
| TGAAG | 1046995 | 0.70764923 | 21.374634 | 12 |
| AAATT | 722265 | 0.70651 | 19.771547 | 13 |
| GAGTC | 1046335 | 0.705561 | 24.836567 | 11 |
| GCCAG | 987815 | 0.7045933 | 22.661013 | 6 |
| TCTCA | 722305 | 0.7032714 | 15.854247 | 25 |
| CTGGT | 1102745 | 0.7013422 | 17.451914 | 3 |
| GTCCG | 1037430 | 0.6979315 | 19.688961 | 6 |
| CTGCT | 886445 | 0.6967477 | 16.261147 | 8 |
| CCCGG | 974890 | 0.6937593 | 16.681496 | 13 |
| TCCGA | 827825 | 0.6898762 | 23.63709 | 7 |
| CCAGG | 961565 | 0.6858696 | 13.7748785 | 11 |
| CTGTA | 868665 | 0.68436176 | 6.484024 | 19 |
| GAAGA | 953595 | 0.6833548 | 22.468115 | 13 |
| ACGTT | 866270 | 0.682475 | 5.886213 | 5 |
| TATGG | 1070120 | 0.68217695 | 7.795846 | 22 |
| AGGTT | 1061665 | 0.67678714 | 19.854227 | 10 |
| CTTGT | 909550 | 0.6758513 | 20.629576 | 8 |
| AACAT | 652745 | 0.6754052 | 13.470012 | 1 |
| CTACT | 693620 | 0.6753422 | 7.5482736 | 8 |
| TGGTC | 1059895 | 0.6740897 | 18.168928 | 4 |
| TCCTT | 733100 | 0.6732195 | 6.6937594 | 11 |
| CCACG | 763475 | 0.6730179 | 6.561616 | 3 |
| ATCTC | 690380 | 0.6721876 | 15.964082 | 24 |
| TAAAT | 685595 | 0.6706398 | 19.40292 | 12 |
| CGGCC | 938370 | 0.66777074 | 16.896843 | 15 |
| GTTAT | 889930 | 0.6628116 | 13.942941 | 21 |
| TTTGA | 885315 | 0.6593745 | 14.945218 | 16 |
| GGTCC | 978080 | 0.6580038 | 19.638187 | 5 |
| TGGAG | 1197990 | 0.6536542 | 20.306374 | 9 |
| TGGTT | 1083840 | 0.6516598 | 9.294743 | 8 |
| GGAGT | 1186320 | 0.6472867 | 20.241686 | 10 |
| CACTA | 623595 | 0.6437449 | 7.3793015 | 6 |
| CCGGC | 902735 | 0.6424118 | 16.730188 | 14 |
| CCCAA | 587235 | 0.6412425 | 11.641803 | 10 |
| TAGGC | 950025 | 0.64061743 | 14.098553 | 17 |
| GGTTG | 1236065 | 0.6361028 | 16.167782 | 11 |
| TATTG | 849620 | 0.6327891 | 17.62648 | 1 |
| TAGGT | 991750 | 0.6322178 | 19.272852 | 9 |
| AAGTA | 754755 | 0.631914 | 19.381226 | 4 |
| TAGAA | 753900 | 0.63119817 | 12.362194 | 19 |
| TTGTC | 848420 | 0.630428 | 20.623728 | 9 |
| TTTTG | 894900 | 0.62863696 | 6.716656 | 21 |
| GTCCC | 754940 | 0.6276758 | 19.65367 | 11 |
| TCGGT | 981995 | 0.6245456 | 8.476367 | 15 |
| GTAAT | 786335 | 0.6209415 | 18.539883 | 6 |
| TCGCC | 744640 | 0.6191121 | 11.31948 | 27 |
| GTGCT | 967260 | 0.6151742 | 6.8307123 | 15 |
| CTAAA | 593820 | 0.6144346 | 20.483232 | 11 |
| GTTGT | 1018920 | 0.6126265 | 15.6722555 | 12 |
| TTGTG | 1013905 | 0.6096113 | 6.928702 | 13 |
| CTTCT | 648210 | 0.5952634 | 7.023971 | 1 |
| TGTCC | 751385 | 0.59059024 | 17.928371 | 10 |
| TCACA | 561370 | 0.5795092 | 18.51511 | 2 |
| TACCA | 552960 | 0.5708274 | 9.594157 | 23 |
| GCTGC | 839830 | 0.56499606 | 20.920517 | 3 |
| TGAGT | 878435 | 0.5599821 | 10.657299 | 18 |
| TGTAG | 876205 | 0.5585606 | 5.755627 | 11 |
| ACTAC | 540520 | 0.5579855 | 7.47916 | 7 |
| AGTAA | 665720 | 0.55737007 | 19.37271 | 5 |
| GCATT | 706620 | 0.5566976 | 13.044234 | 1 |
| AACTT | 564020 | 0.5504356 | 7.0249524 | 29 |
| GGCTA | 814830 | 0.54945326 | 11.19851 | 9 |
| TGGTA | 858200 | 0.54708284 | 9.813214 | 16 |
| ACAGT | 650145 | 0.5430659 | 13.928761 | 4 |
| GAGTT | 850645 | 0.5422667 | 10.816388 | 19 |
| AATCT | 555195 | 0.54182315 | 5.742089 | 45 |
| CCGAA | 610050 | 0.5390225 | 16.56631 | 8 |
| CAATC | 519030 | 0.5358011 | 8.167783 | 45 |
| ACGGA | 748960 | 0.5354651 | 7.3208966 | 3 |
| GTCGG | 981940 | 0.53452754 | 7.383627 | 14 |
| GGATA | 790565 | 0.5343318 | 15.562684 | 14 |
| ATAGG | 789090 | 0.53333485 | 16.100874 | 16 |
| CTGTC | 673050 | 0.52901876 | 10.6980715 | 12 |
| ACATT | 534850 | 0.5219681 | 12.819429 | 2 |
| AATTG | 658875 | 0.5202908 | 5.947925 | 29 |
| CGCCT | 622970 | 0.5179527 | 5.858654 | 28 |
| TCAAG | 614890 | 0.5136174 | 19.300573 | 2 |
| ATCCA | 495290 | 0.511294 | 19.593603 | 9 |
| TAATC | 520585 | 0.50804675 | 18.768612 | 7 |
| GAATC | 607380 | 0.50734437 | 7.3521204 | 6 |
| ATCCC | 491110 | 0.5058016 | 13.816106 | 8 |
| TACTG | 640065 | 0.50426346 | 5.9609675 | 9 |
| GGTTA | 780720 | 0.49769112 | 7.2510633 | 17 |
| CTCAG | 595260 | 0.49606583 | 5.0050344 | 18 |
| GATAG | 733015 | 0.4954346 | 15.578196 | 15 |
| CTAAG | 586500 | 0.4899032 | 14.275244 | 11 |
| AGCAG | 684195 | 0.48916176 | 6.116946 | 16 |
| CGGAA | 672100 | 0.48051447 | 6.289657 | 4 |
| CAACG | 541520 | 0.47847137 | 10.146705 | 7 |
| ACATC | 463170 | 0.47813615 | 13.054741 | 6 |
| CTTGA | 604385 | 0.47615364 | 6.0442004 | 16 |
| AAGGT | 700835 | 0.47368455 | 11.329945 | 11 |
| GTGAG | 865795 | 0.47240007 | 9.165574 | 17 |
| CGATG | 699585 | 0.47174168 | 7.325761 | 9 |
| AGTGA | 697575 | 0.47148114 | 11.364366 | 16 |
| AGTTA | 595920 | 0.47057745 | 12.990987 | 20 |
| CACAG | 531035 | 0.46920714 | 15.63343 | 3 |
| TGCTA | 594460 | 0.4683344 | 15.576072 | 9 |
| TCCCA | 451365 | 0.4648677 | 8.463617 | 9 |
| GGTTC | 728835 | 0.46353668 | 9.873657 | 9 |
| ACTAG | 552195 | 0.46124828 | 5.5681715 | 20 |
| AGAGC | 643195 | 0.45984903 | 7.9837923 | 11 |
| AAAGC | 518385 | 0.4590961 | 7.411475 | 14 |
| AAAGA | 517075 | 0.4590018 | 6.608436 | 2 |
| AAGTT | 576330 | 0.4551079 | 13.088226 | 13 |
| TTCAC | 466160 | 0.45387614 | 16.12808 | 1 |
| ACATG | 543325 | 0.45383915 | 5.0846987 | 22 |
| CGGTG | 832790 | 0.45333642 | 7.306884 | 16 |
| AACGC | 512970 | 0.45324546 | 10.497729 | 8 |
| TTCAG | 574800 | 0.45284566 | 11.750731 | 11 |
| TATCT | 489845 | 0.45088086 | 15.18645 | 23 |
| ATTCA | 461345 | 0.45023352 | 12.742673 | 4 |
| CTCCT | 462040 | 0.44882005 | 7.080588 | 10 |
| TAAGT | 567275 | 0.44795743 | 13.452012 | 12 |
| CTTTT | 513565 | 0.44585097 | 6.4884186 | 13 |
| CGCTG | 660550 | 0.44438538 | 7.9896364 | 10 |
| GTAAA | 528270 | 0.4422908 | 10.556855 | 2 |
| CATTC | 453095 | 0.4411554 | 12.960945 | 3 |
| TGTAA | 556900 | 0.43976465 | 10.040912 | 1 |
| CTCGC | 528515 | 0.43942043 | 11.852446 | 26 |
| TCCCT | 451695 | 0.43877104 | 6.8269377 | 1 |
| AAGCA | 492865 | 0.43649486 | 7.598953 | 15 |
| AAACA | 397615 | 0.43620688 | 13.816929 | 4 |
| CCAAA | 397530 | 0.43510085 | 8.961208 | 11 |
| CAAAG | 488160 | 0.43232796 | 8.868304 | 1 |
| AGTTC | 548495 | 0.43212178 | 12.952879 | 14 |
| TTTGT | 604315 | 0.42451084 | 9.539277 | 12 |
| AAATA | 407050 | 0.42216122 | 5.5201406 | 12 |
| TCCGT | 536525 | 0.42170984 | 6.071144 | 4 |
| TAAAC | 406355 | 0.4204617 | 13.121462 | 3 |
| AAAAG | 468000 | 0.41543847 | 7.5768166 | 13 |
| TTGGT | 689675 | 0.4146677 | 8.142852 | 4 |
| CGAAG | 579770 | 0.4145036 | 12.219511 | 9 |
| GGGTT | 798870 | 0.41111386 | 5.8823633 | 19 |
| ATCCT | 421885 | 0.41076776 | 7.461098 | 8 |
| GTTCA | 516625 | 0.40701354 | 11.87426 | 10 |
| CTCAC | 385945 | 0.39749065 | 7.5987225 | 4 |
| GGTGA | 716325 | 0.3908454 | 6.241271 | 17 |
| TCAAC | 377240 | 0.38942954 | 12.022484 | 6 |
| CTAGT | 491605 | 0.387302 | 5.038167 | 21 |
| GCAGC | 539605 | 0.38489196 | 5.881943 | 17 |
| TGGGT | 742025 | 0.38186032 | 5.7975564 | 18 |
| AGACC | 430995 | 0.38081473 | 5.0264792 | 4 |
| GTGGC | 697105 | 0.37947515 | 10.31299 | 7 |
| CATCC | 363850 | 0.37473467 | 12.738288 | 7 |
| CGACT | 448750 | 0.37397027 | 7.2866936 | 13 |
| CCGAT | 444440 | 0.3703785 | 8.150177 | 8 |
| CAATT | 375230 | 0.3661926 | 11.146186 | 28 |
| GTTCT | 492600 | 0.36603194 | 6.1655684 | 15 |
| CCAGA | 413805 | 0.3656261 | 8.168849 | 25 |
| TCTCC | 375195 | 0.36445987 | 7.3144073 | 9 |
| CCTTT | 394910 | 0.36265326 | 6.6983047 | 12 |
| ACCTC | 351465 | 0.36197916 | 5.5803156 | 5 |
| AGCAT | 426415 | 0.35618433 | 5.1401863 | 4 |
| CAAAA | 324155 | 0.35561693 | 9.510452 | 12 |
| ATCAC | 341300 | 0.3523282 | 6.874255 | 21 |
| TCACT | 355330 | 0.3459666 | 7.0305033 | 5 |
| GAGAG | 597560 | 0.34568876 | 6.5495224 | 10 |
| TTCCG | 433650 | 0.34084988 | 6.0190053 | 3 |
| GACTA | 402275 | 0.33602017 | 6.206863 | 19 |
| AGAGG | 579430 | 0.33520055 | 5.2659893 | 1 |
| GGAAG | 577735 | 0.33421993 | 5.8286457 | 18 |
| AACGG | 461660 | 0.33006147 | 7.1276145 | 2 |
| TGTTT | 468600 | 0.32917562 | 6.289348 | 19 |
| GAAGC | 455610 | 0.32573608 | 6.7574854 | 19 |
| CAGCT | 390040 | 0.3250437 | 7.4356546 | 18 |
| CAGCA | 364260 | 0.32184958 | 5.515003 | 3 |
| ACGCT | 384345 | 0.32029772 | 9.724009 | 9 |
| CAGAG | 430795 | 0.3079947 | 6.179558 | 8 |
| ACCAG | 347940 | 0.3074297 | 8.224813 | 24 |
| CCTCA | 291805 | 0.30053443 | 5.173722 | 17 |
| TCCCC | 291590 | 0.2996156 | 5.420039 | 9 |
| TGTCG | 471080 | 0.29960534 | 8.328478 | 13 |
| CCGAC | 336495 | 0.2966268 | 5.0510607 | 12 |
| CCCTC | 287135 | 0.29503798 | 5.279597 | 16 |
| CCCCT | 284305 | 0.29213008 | 5.372724 | 15 |
| CTACA | 280170 | 0.289223 | 5.912398 | 3 |
| TTATG | 381170 | 0.28389192 | 6.261482 | 21 |
| ATGGT | 428915 | 0.27342343 | 6.1294875 | 11 |
| TTTCC | 293130 | 0.2691868 | 6.344876 | 2 |
| TTACC | 270385 | 0.26326004 | 8.992815 | 22 |
| TACAT | 260955 | 0.25466987 | 5.321451 | 4 |
| CTGCA | 296770 | 0.24731623 | 6.07467 | 11 |
| CATAG | 292935 | 0.2446885 | 7.216583 | 16 |
| GTTTC | 309995 | 0.23034525 | 5.2038164 | 1 |
| TGTGC | 358210 | 0.22782037 | 6.616528 | 14 |
| CCGTA | 270330 | 0.2252822 | 6.2629337 | 5 |
| TTCGC | 282615 | 0.222136 | 5.1003046 | 27 |
| CGTAG | 324570 | 0.21886289 | 5.236782 | 6 |
| TGCAT | 277700 | 0.21878086 | 5.00009 | 14 |
| GTTAC | 269420 | 0.21225761 | 7.324634 | 21 |
| GCATA | 231965 | 0.19376028 | 5.247798 | 15 |
| TCACG | 227170 | 0.18931437 | 5.414671 | 22 |